sequencing raw reads Search Results


raw sequence reads  (Theragen Etex)
90
Theragen Etex raw sequence reads
Raw Sequence Reads, supplied by Theragen Etex, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pm31608070-97-0-8?v=Theragen+Etex
Average 90 stars, based on 1 article reviews
raw sequence reads - by Bioz Stars, 2026-07
90/100 stars
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sequence reads from oxford nanopore sequencing  (Oxford Nanopore)
90
Oxford Nanopore sequence reads from oxford nanopore sequencing
Sequence Reads From Oxford Nanopore Sequencing, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pmc08315533-74-11-13?v=Oxford+Nanopore
Average 90 stars, based on 1 article reviews
sequence reads from oxford nanopore sequencing - by Bioz Stars, 2026-07
90/100 stars
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raw sequence reads (fastq)  (MedGenome)
90
MedGenome raw sequence reads (fastq)
Raw Sequence Reads (Fastq), supplied by MedGenome, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pm40578318-270-2-6?v=MedGenome
Average 90 stars, based on 1 article reviews
raw sequence reads (fastq) - by Bioz Stars, 2026-07
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raw sequence reads  (Gallus BioPharmaceuticals)
90
Gallus BioPharmaceuticals raw sequence reads
Raw Sequence Reads, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/10__21203_slash_rs__3__rs___3086064_slash_v1-714-0-1?v=Gallus+BioPharmaceuticals
Average 90 stars, based on 1 article reviews
raw sequence reads - by Bioz Stars, 2026-07
90/100 stars
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raw sequence reads srr28967830  (Oxford Nanopore)
90
Oxford Nanopore raw sequence reads srr28967830
Raw Sequence Reads Srr28967830, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pm39565125-39-0-17?v=Oxford+Nanopore
Average 90 stars, based on 1 article reviews
raw sequence reads srr28967830 - by Bioz Stars, 2026-07
90/100 stars
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raw sequencing reads  (Rosalina Instruments)
90
Rosalina Instruments raw sequencing reads
A) Scanning electron micrographs of the sampled species. Species with clearly distinct lateral views are shown from two sides. B) Presence/absence of homologs of denitrification proteins identified for different foraminifera. Half circles indicate species where only a single, of multiple subtypes, was found. Dashed circles illustrate homologs discarded due to low coverage and asterisks highlight corresponding species. Evidence for NO 3 - storage and/or denitrification activity is illustrated by closed circles in the last column. Question marks denote missing information. Foraminifera sampled in this study are highlighted by the location ‘Peru’. Protein symbols: Nrt: nitrate/nitrite transporter; NapA: periplasmic nitrate reductase; NarG: membrane-bound nitrate reductase; NirK: copper-containing nitrite reductase; NirS: cd 1 -containing nitrite reductase; Nor: nitric oxide reductase; NosZ: nitrous oxide reductase. Note that the identification of homologous genes is based not only on <t>sequence</t> similarity but also on transcript abundance in order to exclude bystander species in the data. The additional data filtration stage affected our findings for Rosalina sp., B. plicata and N. auris (Suppl. Table S2 & S3), where the presence of at least one the crucial homologs (i.e, NirK or Nor) remained in the B. plicata and N. auris metatranscriptomes.
Raw Sequencing Reads, supplied by Rosalina Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/bio_rxiv__2021__12__27__474233-210-0-15?v=Rosalina+Instruments
Average 90 stars, based on 1 article reviews
raw sequencing reads - by Bioz Stars, 2026-07
90/100 stars
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raw sequencing read alignment  (CLC Bio)
90
CLC Bio raw sequencing read alignment
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Sequencing Read Alignment, supplied by CLC Bio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pmc08535313-247-1-14?v=CLC+Bio
Average 90 stars, based on 1 article reviews
raw sequencing read alignment - by Bioz Stars, 2026-07
90/100 stars
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raw sequence reads  (LGC Genomics GmbH)
90
LGC Genomics GmbH raw sequence reads
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Sequence Reads, supplied by LGC Genomics GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pm38899733-248-2-7?v=LGC+Genomics+GmbH
Average 90 stars, based on 1 article reviews
raw sequence reads - by Bioz Stars, 2026-07
90/100 stars
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raw read datasets (sequenced using oxford nanopore technologies)  (Oxford Nanopore)
90
Oxford Nanopore raw read datasets (sequenced using oxford nanopore technologies)
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Read Datasets (Sequenced Using Oxford Nanopore Technologies), supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/bio_rxiv__2023__04__19__537514-157-6-13?v=Oxford+Nanopore
Average 90 stars, based on 1 article reviews
raw read datasets (sequenced using oxford nanopore technologies) - by Bioz Stars, 2026-07
90/100 stars
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raw reads #r1 genome sequencing using oxford nanopore (ont)  (Oxford Nanopore)
90
Oxford Nanopore raw reads #r1 genome sequencing using oxford nanopore (ont)
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Reads #R1 Genome Sequencing Using Oxford Nanopore (Ont), supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pm39152143-152-7-10?v=Oxford+Nanopore
Average 90 stars, based on 1 article reviews
raw reads #r1 genome sequencing using oxford nanopore (ont) - by Bioz Stars, 2026-07
90/100 stars
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raw pacific biosciences smrt sequencing reads  (Pacific Biosciences)
86
Pacific Biosciences raw pacific biosciences smrt sequencing reads
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Pacific Biosciences Smrt Sequencing Reads, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pmc12817950-350-0-1?v=Pacific+Biosciences
Average 86 stars, based on 1 article reviews
raw pacific biosciences smrt sequencing reads - by Bioz Stars, 2026-07
86/100 stars
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raw fastq reads  (Novogene)
86
Novogene raw fastq reads
Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger <t> sequencing. </t> Counts and percentages depicted as twin sibling affected and twin sibling not affected.
Raw Fastq Reads, supplied by Novogene, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+raw+reads/pmc12418683-59-0-6?v=Novogene
Average 86 stars, based on 1 article reviews
raw fastq reads - by Bioz Stars, 2026-07
86/100 stars
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Image Search Results


A) Scanning electron micrographs of the sampled species. Species with clearly distinct lateral views are shown from two sides. B) Presence/absence of homologs of denitrification proteins identified for different foraminifera. Half circles indicate species where only a single, of multiple subtypes, was found. Dashed circles illustrate homologs discarded due to low coverage and asterisks highlight corresponding species. Evidence for NO 3 - storage and/or denitrification activity is illustrated by closed circles in the last column. Question marks denote missing information. Foraminifera sampled in this study are highlighted by the location ‘Peru’. Protein symbols: Nrt: nitrate/nitrite transporter; NapA: periplasmic nitrate reductase; NarG: membrane-bound nitrate reductase; NirK: copper-containing nitrite reductase; NirS: cd 1 -containing nitrite reductase; Nor: nitric oxide reductase; NosZ: nitrous oxide reductase. Note that the identification of homologous genes is based not only on sequence similarity but also on transcript abundance in order to exclude bystander species in the data. The additional data filtration stage affected our findings for Rosalina sp., B. plicata and N. auris (Suppl. Table S2 & S3), where the presence of at least one the crucial homologs (i.e, NirK or Nor) remained in the B. plicata and N. auris metatranscriptomes.

Journal: bioRxiv

Article Title: Denitrification in foraminifera has ancient origins and is complemented by associated bacteria

doi: 10.1101/2021.12.27.474233

Figure Lengend Snippet: A) Scanning electron micrographs of the sampled species. Species with clearly distinct lateral views are shown from two sides. B) Presence/absence of homologs of denitrification proteins identified for different foraminifera. Half circles indicate species where only a single, of multiple subtypes, was found. Dashed circles illustrate homologs discarded due to low coverage and asterisks highlight corresponding species. Evidence for NO 3 - storage and/or denitrification activity is illustrated by closed circles in the last column. Question marks denote missing information. Foraminifera sampled in this study are highlighted by the location ‘Peru’. Protein symbols: Nrt: nitrate/nitrite transporter; NapA: periplasmic nitrate reductase; NarG: membrane-bound nitrate reductase; NirK: copper-containing nitrite reductase; NirS: cd 1 -containing nitrite reductase; Nor: nitric oxide reductase; NosZ: nitrous oxide reductase. Note that the identification of homologous genes is based not only on sequence similarity but also on transcript abundance in order to exclude bystander species in the data. The additional data filtration stage affected our findings for Rosalina sp., B. plicata and N. auris (Suppl. Table S2 & S3), where the presence of at least one the crucial homologs (i.e, NirK or Nor) remained in the B. plicata and N. auris metatranscriptomes.

Article Snippet: Additional raw sequencing reads were obtained from the Marine Microbial Transcriptome Project (MMETSP; SRA accessions: Rosalina sp., SRR1296887; Sorites sp., SRR1296734; Ammonia sp., SRR1300434; Elphidium margaritaceum , SRR1300475) and processed as described above.

Techniques: Activity Assay, Membrane, Sequencing, Filtration

Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger sequencing. Counts and percentages depicted as twin sibling affected and twin sibling not affected.

Journal: Genes

Article Title: Heritability and De Novo Mutations in Oesophageal Atresia and Tracheoesophageal Fistula Aetiology

doi: 10.3390/genes12101595

Figure Lengend Snippet: Determination of the exonic sequence differences in discordant monozygotic twins. All DNA was extracted from blood. CNVdiff; differences in Copy Number Variation size or presence between twin pairs, TAR; total of aligning reads, TARot; total aligning reads on target, ACot; average coverage on target, ACot20; percentage of target covered at least 20X, PPA; predicted protein altering including variants affecting splicing, PPArare,; rare (MAF < 0.001) protein altering, PSD; putative sequence differences, sequence differences depicted using (1) GATK unified genotyper, (2) negative binomial statistics, and (3) Fisher exact test and repeat filter. DAV; differences after validation with Sanger sequencing. Counts and percentages depicted as twin sibling affected and twin sibling not affected.

Article Snippet: Moreover, raw sequencing read alignment, variant calling, and quality control was also performed using CLC-bio (Qiagen Inc., Venlo, the Netherlands).

Techniques: Sequencing, Biomarker Discovery